Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-590-3p in CCC Ovarian Hendrix Cluster 42 Table contains all genes in the CCC Ovarian Hendrix cluster number 42. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-590-3p 51596 CUTA cutA divalent cation tolerance homolog (E. coli) [Source:HGNC Symbol;Acc:21101] zzz999 10179 RBM7 RNA binding motif protein 7 [Source:HGNC Symbol;Acc:9904] P T 5569 PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha [Source:HGNC Symbol;Acc:9017] zzz999 10989 IMMT inner membrane protein, mitochondrial [Source:HGNC Symbol;Acc:6047] zzz999 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] zzz999 10336 PCGF3 polycomb group ring finger 3 [Source:HGNC Symbol;Acc:10066] P T 53371 NUP54 nucleoporin 54kDa [Source:HGNC Symbol;Acc:17359] zzz999 22930 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) [Source:HGNC Symbol;Acc:17063] P T 6671 SP4 Sp4 transcription factor [Source:HGNC Symbol;Acc:11209] T 6734 SRPR signal recognition particle receptor (docking protein) [Source:HGNC Symbol;Acc:11307] zzz999 56942 C16orf61 chromosome 16 open reading frame 61 [Source:HGNC Symbol;Acc:24447] zzz999 1880 GPR183 G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:3128] zzz999 6093 ROCK1 Rho-associated, coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:10251] T 6166 RPL36AL ribosomal protein L36a-like [Source:HGNC Symbol;Acc:10346] zzz999 2959 GTF2B general transcription factor IIB [Source:HGNC Symbol;Acc:4648] zzz999 5981 RFC1 replication factor C (activator 1) 1, 145kDa [Source:HGNC Symbol;Acc:9969] zzz999 11234 HPS5 Hermansky-Pudlak syndrome 5 [Source:HGNC Symbol;Acc:17022] T 6490 PMEL premelanosome protein [Source:HGNC Symbol;Acc:10880] zzz999 64769 MEAF6 MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] P T 6048 RNF5 ring finger protein 5 [Source:HGNC Symbol;Acc:10068] zzz999 51138 COPS4 COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:HGNC Symbol;Acc:16702] zzz999 8533 COPS3 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) [Source:HGNC Symbol;Acc:2239] zzz999 10575 CCT4 chaperonin containing TCP1, subunit 4 (delta) [Source:HGNC Symbol;Acc:1617] zzz999 27181 SIGLEC8 sialic acid binding Ig-like lectin 8 [Source:HGNC Symbol;Acc:10877] zzz999 26277 TINF2 TERF1 (TRF1)-interacting nuclear factor 2 [Source:HGNC Symbol;Acc:11824] zzz999 6049 RNF6 ring finger protein (C3H2C3 type) 6 [Source:HGNC Symbol;Acc:10069] P T 4711 NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa [Source:HGNC Symbol;Acc:7700] T 54708 MARCH5 membrane-associated ring finger (C3HC4) 5 [Source:HGNC Symbol;Acc:26025] P T 5702 PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Source:HGNC Symbol;Acc:9549] zzz999 56994 CHPT1 choline phosphotransferase 1 [Source:HGNC Symbol;Acc:17852] zzz999 7411 VBP1 von Hippel-Lindau binding protein 1 [Source:HGNC Symbol;Acc:12662] T 4799 NFX1 nuclear transcription factor, X-box binding 1 [Source:HGNC Symbol;Acc:7803] T 399664 MEX3D mex-3 homolog D (C. elegans) [Source:HGNC Symbol;Acc:16734] P T 5631 PRPS1 phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] zzz999 2483 FRG1 FSHD region gene 1 [Source:HGNC Symbol;Acc:3954] zzz999 1819 DRG2 developmentally regulated GTP binding protein 2 [Source:HGNC Symbol;Acc:3030] zzz999 6885 MAP3K7 mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:6859] T 1629 DBT dihydrolipoamide branched chain transacylase E2 [Source:HGNC Symbol;Acc:2698] P T 6399 TRAPPC2 trafficking protein particle complex 2 [Source:HGNC Symbol;Acc:23068] T 51552 RAB14 RAB14, member RAS oncogene family [Source:HGNC Symbol;Acc:16524] P T 6612 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:11124] T 51398 C19orf56 chromosome 19 open reading frame 56 [Source:HGNC Symbol;Acc:30203] zzz999 10678 B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 [Source:HGNC Symbol;Acc:15629] P T 27309 ZNF330 zinc finger protein 330 [Source:HGNC Symbol;Acc:15462] zzz999 55788 LMBRD1 LMBR1 domain containing 1 [Source:HGNC Symbol;Acc:23038] zzz999 5238 PGM3 phosphoglucomutase 3 [Source:HGNC Symbol;Acc:8907] T 10640 EXOC5 exocyst complex component 5 [Source:HGNC Symbol;Acc:10696] P T 55576 STAB2 stabilin 2 [Source:HGNC Symbol;Acc:18629] zzz999 10539 GLRX3 glutaredoxin 3 [Source:HGNC Symbol;Acc:15987] zzz999 11099 PTPN21 protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:9651] T 4670 HNRNPM heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:5046] zzz999 56650 CLDND1 claudin domain containing 1 [Source:HGNC Symbol;Acc:1322] P T 5110 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:HGNC Symbol;Acc:8728] T 55781 RIOK2 RIO kinase 2 (yeast) [Source:HGNC Symbol;Acc:18999] zzz999 3176 HNMT histamine N-methyltransferase [Source:HGNC Symbol;Acc:5028] T 6883 TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa [Source:HGNC Symbol;Acc:11545] zzz999 22800 RRAS2 related RAS viral (r-ras) oncogene homolog 2 [Source:HGNC Symbol;Acc:17271] P T 81542 TMX1 thioredoxin-related transmembrane protein 1 [Source:HGNC Symbol;Acc:15487] T 7171 TPM4 tropomyosin 4 [Source:HGNC Symbol;Acc:12013] T 10294 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:HGNC Symbol;Acc:14884] P T 25836 NIPBL Nipped-B homolog (Drosophila) [Source:HGNC Symbol;Acc:28862] P T 5716 PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 [Source:HGNC Symbol;Acc:9555] zzz999 55425 KIAA1704 KIAA1704 [Source:HGNC Symbol;Acc:20298] zzz999 55088 C10orf118 chromosome 10 open reading frame 118 [Source:HGNC Symbol;Acc:24349] T 10472 ZNF238 zinc finger protein 238 [Source:HGNC Symbol;Acc:13030] P T 6206 RPS12 ribosomal protein S12 [Source:HGNC Symbol;Acc:10385] zzz999 5283 PIGH phosphatidylinositol glycan anchor biosynthesis, class H [Source:HGNC Symbol;Acc:8964] zzz999 3988 LIPA lipase A, lysosomal acid, cholesterol esterase [Source:HGNC Symbol;Acc:6617] T 51475 CABP2 calcium binding protein 2 [Source:HGNC Symbol;Acc:1385] zzz999 1983 EIF5 eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:3299] P T 22936 ELL2 elongation factor, RNA polymerase II, 2 [Source:HGNC Symbol;Acc:17064] P T 23118 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:HGNC Symbol;Acc:17075] T 23404 EXOSC2 exosome component 2 [Source:HGNC Symbol;Acc:17097] T 6050 RNH1 ribonuclease/angiogenin inhibitor 1 [Source:HGNC Symbol;Acc:10074] zzz999 11011 TLK2 tousled-like kinase 2 [Source:HGNC Symbol;Acc:11842] T 2958 GTF2A2 general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647] zzz999 55071 C9orf40 chromosome 9 open reading frame 40 [Source:HGNC Symbol;Acc:23433] zzz999 11333 PDAP1 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:14634] T 2395 FXN frataxin [Source:HGNC Symbol;Acc:3951] zzz999 7251 TSG101 tumor susceptibility gene 101 [Source:HGNC Symbol;Acc:15971] P T 11163 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051] T 5910 RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:9859] T 64854 USP46 ubiquitin specific peptidase 46 [Source:HGNC Symbol;Acc:20075] P T 8677 STX10 syntaxin 10 [Source:HGNC Symbol;Acc:11428] zzz999 91607 SLFN11 schlafen family member 11 [Source:HGNC Symbol;Acc:26633] T 51141 INSIG2 insulin induced gene 2 [Source:HGNC Symbol;Acc:20452] P T 7857 SCG2 secretogranin II [Source:HGNC Symbol;Acc:10575] zzz999 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Source:HGNC Symbol;Acc:2745] P T 9337 CNOT8 CCR4-NOT transcription complex, subunit 8 [Source:HGNC Symbol;Acc:9207] zzz999 51104 FAM108B1 family with sequence similarity 108, member B1 [Source:HGNC Symbol;Acc:24278] P T 11183 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:6867] T 29058 C20orf30 chromosome 20 open reading frame 30 [Source:HGNC Symbol;Acc:15876] zzz999 4170 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) [Source:HGNC Symbol;Acc:6943] zzz999 23478 SEC11A SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718] P T 51495 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 [Source:HGNC Symbol;Acc:24175] T 55664 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 [Source:HGNC Symbol;Acc:17179] zzz999 5682 PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 [Source:HGNC Symbol;Acc:9530] P T 9802 DAZAP2 DAZ associated protein 2 [Source:HGNC Symbol;Acc:2684] zzz999 57610 RANBP10 RAN binding protein 10 [Source:HGNC Symbol;Acc:29285] P T 8795 TNFRSF10B tumor necrosis factor receptor superfamily, member 10b [Source:HGNC Symbol;Acc:11905] zzz999 9263 STK17A serine/threonine kinase 17a [Source:HGNC Symbol;Acc:11395] P T 57150 C6orf162 chromosome 6 open reading frame 162 [Source:HGNC Symbol;Acc:21401] zzz999 83604 TMEM47 transmembrane protein 47 [Source:HGNC Symbol;Acc:18515] P T 28978 TMEM14A transmembrane protein 14A [Source:HGNC Symbol;Acc:21076] zzz999 51714 zzz999 zzz999 T 10558 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 [Source:HGNC Symbol;Acc:11277] T 4189 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 [Source:HGNC Symbol;Acc:6968] P T 2897 GRIK1 glutamate receptor, ionotropic, kainate 1 [Source:HGNC Symbol;Acc:4579] zzz999 56898 BDH2 3-hydroxybutyrate dehydrogenase, type 2 [Source:HGNC Symbol;Acc:32389] T 2799 GNS glucosamine (N-acetyl)-6-sulfatase [Source:HGNC Symbol;Acc:4422] P T 8724 SNX3 sorting nexin 3 [Source:HGNC Symbol;Acc:11174] T 440138 ALG11 asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast) [Source:HGNC Symbol;Acc:32456] T 10550 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 [Source:HGNC Symbol;Acc:16937] T 56124 PCDHB12 protocadherin beta 12 [Source:HGNC Symbol;Acc:8683] zzz999 8504 PEX3 peroxisomal biogenesis factor 3 [Source:HGNC Symbol;Acc:8858] P T 10289 EIF1B eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:30792] zzz999 51616 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa [Source:HGNC Symbol;Acc:17306] zzz999 79658 ARHGAP10 Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:26099] zzz999 4331 MNAT1 menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) [Source:HGNC Symbol;Acc:7181] T 24149 ZNF318 zinc finger protein 318 [Source:HGNC Symbol;Acc:13578] zzz999 4802 NFYC nuclear transcription factor Y, gamma [Source:HGNC Symbol;Acc:7806] zzz999 3312 HSPA8 heat shock 70kDa protein 8 [Source:HGNC Symbol;Acc:5241] P T 23587 C17orf81 chromosome 17 open reading frame 81 [Source:HGNC Symbol;Acc:30617] zzz999 23589 CARHSP1 calcium regulated heat stable protein 1, 24kDa [Source:HGNC Symbol;Acc:17150] T 9522 zzz999 zzz999 T 51510 CHMP5 chromatin modifying protein 5 [Source:HGNC Symbol;Acc:26942] P T 79073 TMEM109 transmembrane protein 109 [Source:HGNC Symbol;Acc:28771] zzz999 10144 FAM13A family with sequence similarity 13, member A [Source:HGNC Symbol;Acc:19367] zzz999 581 BAX BCL2-associated X protein [Source:HGNC Symbol;Acc:959] zzz999 23306 TMEM194A transmembrane protein 194A [Source:HGNC Symbol;Acc:29001] T 57570 TRMT5 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23141] T 308 ANXA5 annexin A5 [Source:HGNC Symbol;Acc:543] T 65243 ZNF643 zinc finger protein 643 [Source:HGNC Symbol;Acc:28053] zzz999 10668 CGRRF1 cell growth regulator with ring finger domain 1 [Source:HGNC Symbol;Acc:15528] T 55086 CXorf57 chromosome X open reading frame 57 [Source:HGNC Symbol;Acc:25486] zzz999 10487 CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:HGNC Symbol;Acc:20040] zzz999 23412 COMMD3 COMM domain containing 3 [Source:HGNC Symbol;Acc:23332] zzz999 57091 CASS4 Cas scaffolding protein family member 4 [Source:HGNC Symbol;Acc:15878] zzz999 26578 OSTF1 osteoclast stimulating factor 1 [Source:HGNC Symbol;Acc:8510] T 10419 PRMT5 protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:10894] zzz999 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 23200 ATP11B ATPase, class VI, type 11B [Source:HGNC Symbol;Acc:13553] P T 55786 ZNF415 zinc finger protein 415 [Source:HGNC Symbol;Acc:20636] zzz999 59286 UBL5 ubiquitin-like 5 [Source:HGNC Symbol;Acc:13736] zzz999 80319 CXXC4 CXXC finger protein 4 [Source:HGNC Symbol;Acc:24593] zzz999 51574 LARP7 La ribonucleoprotein domain family, member 7 [Source:HGNC Symbol;Acc:24912] zzz999 10998 SLC27A5 solute carrier family 27 (fatty acid transporter), member 5 [Source:HGNC Symbol;Acc:10999] zzz999 55298 RNF121 ring finger protein 121 [Source:HGNC Symbol;Acc:21070] zzz999 51397 COMMD10 COMM domain containing 10 [Source:HGNC Symbol;Acc:30201] T 8649 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] T 6778 STAT6 signal transducer and activator of transcription 6, interleukin-4 induced [Source:HGNC Symbol;Acc:11368] zzz999 54968 TMEM70 transmembrane protein 70 [Source:HGNC Symbol;Acc:26050] T 56985 C17orf48 chromosome 17 open reading frame 48 [Source:HGNC Symbol;Acc:30925] zzz999 57515 SERINC1 serine incorporator 1 [Source:HGNC Symbol;Acc:13464] T 56890 MDM1 Mdm1 nuclear protein homolog (mouse) [Source:HGNC Symbol;Acc:29917] zzz999 10455 ECI2 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:14601] zzz999 1315 COPB1 coatomer protein complex, subunit beta 1 [Source:HGNC Symbol;Acc:2231] P T 27249 MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:HGNC Symbol;Acc:25221] T 81533 ITFG1 integrin alpha FG-GAP repeat containing 1 [Source:HGNC Symbol;Acc:30697] zzz999 1393 CRHBP corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:2356] zzz999 27430 MAT2B methionine adenosyltransferase II, beta [Source:HGNC Symbol;Acc:6905] T 4200 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:HGNC Symbol;Acc:6984] zzz999 3685 ITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) [Source:HGNC Symbol;Acc:6150] P T 6500 SKP1 S-phase kinase-associated protein 1 [Source:HGNC Symbol;Acc:10899] T 8737 RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 [Source:HGNC Symbol;Acc:10019] T 6879 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa [Source:HGNC Symbol;Acc:11541] zzz999 2665 GDI2 GDP dissociation inhibitor 2 [Source:HGNC Symbol;Acc:4227] P T 2804 GOLGB1 golgin B1 [Source:HGNC Symbol;Acc:4429] P T 900 CCNG1 cyclin G1 [Source:HGNC Symbol;Acc:1592] zzz999 9440 MED17 mediator complex subunit 17 [Source:HGNC Symbol;Acc:2375] zzz999 54901 CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 [Source:HGNC Symbol;Acc:21050] zzz999 8850 KAT2B K(lysine) acetyltransferase 2B [Source:HGNC Symbol;Acc:8638] P T 22862 FNDC3A fibronectin type III domain containing 3A [Source:HGNC Symbol;Acc:20296] P T 7405 UVRAG UV radiation resistance associated gene [Source:HGNC Symbol;Acc:12640] P T 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17351] T 268 AMH anti-Mullerian hormone [Source:HGNC Symbol;Acc:464] zzz999 9782 MATR3 matrin 3 [Source:HGNC Symbol;Acc:6912] zzz999 51601 LIPT1 lipoyltransferase 1 [Source:HGNC Symbol;Acc:29569] zzz999 130074 FAM168B family with sequence similarity 168, member B [Source:HGNC Symbol;Acc:27016] T 9443 MED7 mediator complex subunit 7 [Source:HGNC Symbol;Acc:2378] zzz999 4092 SMAD7 SMAD family member 7 [Source:HGNC Symbol;Acc:6773] zzz999 8891 EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa [Source:HGNC Symbol;Acc:3259] zzz999 2956 MSH6 mutS homolog 6 (E. coli) [Source:HGNC Symbol;Acc:7329] zzz999 22885 ABLIM3 actin binding LIM protein family, member 3 [Source:HGNC Symbol;Acc:29132] zzz999 389 RHOC ras homolog gene family, member C [Source:HGNC Symbol;Acc:669] zzz999 8418 zzz999 zzz999 zzz999

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